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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015912020.1_cds_XP_016462041.1_55309
CDS Infomation

[gene=LOC107785285] [db_xref=GeneID:107785285] [protein=RNA pseudouridine synthase 3, mitochondrial-like] [protein_id=XP_016462041.1] [location=complement(join(2468..2848,3399..3557,3640..3741,3902..4018,4223..4303,4395..4442,4633..4791,4949..5011,5785..6111))] [gbkey=CDS]
Sequence

ATGAGGTGGAACAAAGATGTGAGCCGTTGCTTGTTCTTTTTGGTCAGGCGCTACTCTAGA
TCGGTGGGCCATTCTGCAATAGCAAATCGTCGTCAACCTGTGATTCGAGTGTCAAACAGT
ATAACACATTTGGGCCGTCCAAAGGAGGGTGCAAAGCCTAGTCAGCTATTGTCTTTGCCC
CCATTTCCTGGTCATCCTTTGCCGGGAAAGAAAGCGGCCACCAGTCCTGACCAACCATCT
CGTCATGTTACTGCCATTAGCTGGATCAAATACTATTTTGATGAGATACTAGGCTCTGTC
ATCCAATCCCATTTTAATAAGGGTCTCGTTCAGTTAGAGTTTAATGAGTCATCTACAAGC
AAGGAAGGACAAACTAGATTGCTGAGAAAGATTAAGCATTCTGAGGTCATGGAAGTTGGT
GCAAGAGTTTATGTACCCATATCTGTTGCTGAAACAAAAATCTCAAAACGATATGATGTT
ATACCTAGTGGCACTTTGTACCCCAATGCTGATGAGATAGCATACTTGCAAAGGCTTGTA
TTTTACAAGGACCCTGCCATAATTGTGCTAAACAAGCCCCCCAAACTGCCTGTGAAGGGA
AACCTTCCCGTGCATAATAGCATGGATGCCTTGGCAGCTGCAGCATTGTCCTATGAATAT
GACGAGGGTCCTAGGCTGGTACATCGTCTTGATAGAGAGAGCAGTGGCCTTCATTTAATG
GGAAGAACAGAAGAAAGTATCTCCCACCTTCATTTGTTGTTCAGCAGCACAAAAAGGTCC
AAGTCCCTGTCTAAGGCATGGAATGATGCATGTGGATCAACGTATCAGAGGTATTGGGCG
TTGGTAATAGGTTCCCCCAAGGAGAAGGAAGGCATAATCTCTGCACCACTTACAAAGGTG
CTTCTTGATGATGGTAGAACTGAGAGAGTCATGTTGGCTCAGCACTCAGGATTAGAAGCT
TCTGAGGAGGCTATTACAGAATATCGGCTGCTTGGTCCAATGATCAATGGATGCTCATGG
ATTGAGTTGCGCCCTCATACAAGTAGAAAACATCAGCTTCGAGTCCATTGTGCTGAAGCC
CTTGGAACTCCAATTGTGGGTGACTACAAGTACGGTTGGTTTGTCCATCGGAAATGGAAG
CAGATGCCAAGAGTAGATGTTGAGCCGACAACAGGGAAACCCTACAGATTAAAGAGGCCG
GAAGGTTTGGATGTTCAGAAAGGAAGTGTCTTATCTAAGGTTCCTTTATTACATCTGCAT
TGTAGAGAGCTTGTGCTCCCAAACATTGCCAAGTTTATTGAGCTTCACAGTCGAAAAACA
AGAACTCGCTGTTTAAATGCAGATAATAGCTCAAAACCAGATCTCCTTCGGTTTGTAGCA
CCAATGCCATCTCATATGAAAATTAGTTGGAAGCTTATGTCCTCTTACTTGATATGA

Peptide Sequence

PEP ID

XP_016462041.1
PEP Infomation

PREDICTED: RNA pseudouridine synthase 3, mitochondrial-like [Nicotiana tabacum]
Sequence

MRWNKDVSRCLFFLVRRYSRSVGHSAIANRRQPVIRVSNSITHLGRPKEGAKPSQLLSLP
PFPGHPLPGKKAATSPDQPSRHVTAISWIKYYFDEILGSVIQSHFNKGLVQLEFNESSTS
KEGQTRLLRKIKHSEVMEVGARVYVPISVAETKISKRYDVIPSGTLYPNADEIAYLQRLV
FYKDPAIIVLNKPPKLPVKGNLPVHNSMDALAAAALSYEYDEGPRLVHRLDRESSGLHLM
GRTEESISHLHLLFSSTKRSKSLSKAWNDACGSTYQRYWALVIGSPKEKEGIISAPLTKV
LLDDGRTERVMLAQHSGLEASEEAITEYRLLGPMINGCSWIELRPHTSRKHQLRVHCAEA
LGTPIVGDYKYGWFVHRKWKQMPRVDVEPTTGKPYRLKRPEGLDVQKGSVLSKVPLLHLH
CRELVLPNIAKFIELHSRKTRTRCLNADNSSKPDLLRFVAPMPSHMKISWKLMSSYLI

Transcript Sequence

Gene sequence data has not been registered.